miRBase entry: ggo-mir-1180

Stem-loop ggo-mir-1180


Accession
MI0020761
Description
Gorilla gorilla ggo-mir-1180 precursor miRNA
Gene family
MIPF0000789; mir-1180


Sequence

gccgcgagucccggcggggcgaagcccgcagcugcuggacccacccggccgggaauagugcuccugguugUUUCCGGCUCGCGUGGGUGUGucggcggcggggccugacac
....((.(((((.(((((......))))).((((((((((((((.(((((((((((((..(....).))))))))))).)).))))))...))))))))))))).))....

Structure
gccg  a     ggcggggcgaagcccgca        ---      c  -           ug u 
    cg guccc                  gcugcugg   acccac cg gccgggaauag  c c
    || |||||                  ||||||||   |||||| || |||||||||||  |  
    gu cgggg                  cggcggcu   UGGGUG GC CGGCCUUUguu  g c
caca  c     ------------------        GUG      C  U           -g u 


Annotation confidence Not enough data
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Genome context
chr5: 59471189-59471299 [+]

Database links

Mature ggo-miR-1180

Accession MIMAT0024214
Description Gorilla gorilla ggo-miR-1180 mature miRNA
Sequence 71 - UUUCCGGCUCGCGUGGGUGUG - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116