Stem-loop ggo-mir-381

Accession

MI0020767

Description

Gorilla gorilla ggo-mir-381 precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

ccugcccagugcuauuguuugguacuuaaagcgagguugcccuuuguauauucgguuuauugacauggaaUAUACAAGGGCAAGCUCUCUGugaguaucaaaccuugu
................((((((((((((.((.(((.((((((((.((((((((.((........)).)))))))))))))))).))).)).)))))))))))).....

Structure

ccugcccagugcuauu            a  c   g        u        g  uua 
                guuugguacuua ag gag uugcccuu guauauuc gu   u
                |||||||||||| || ||| |||||||| |||||||| ||    
                caaacuaugagu UC CUC AACGGGAA CAUAUaag ua   u
-----------uguuc            G  U   G        -        g  cag 

Annotation confidence Not enough data

Genome context

chr14: 85068929-85069036 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from ggo-mir-381

Mature ggo-miR-381

• Accession: MIMAT0024220
• Description: Gorilla gorilla ggo-miR-381 mature miRNA
• Sequence: 71 - UAUACAAGGGCAAGCUCUCUG - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116