miRBase entry: ggo-mir-450a

Stem-loop ggo-mir-450a

Accession

MI0020784

Description

Gorilla gorilla ggo-mir-450a precursor miRNA

Gene family

MIPF0000128; mir-450

Sequence

aaagaaagaugcuaaacuauUUUUGCGAUGUGUUCCUAAUAuguaauauaaauguauuggggacauuuugcauucauaguuuuguaucaauaauauggggaaaagaggcua
.......(((((.(((((((...(((((.(((((((((((((((.......))))))))))))))).)))))...))))))).))))).......................

Structure

----------------aaagaaa     u       UUU     U               aa 
                       gaugc aaacuau   UGCGA GUGUUCCUAAUAugu  u
                       ||||| |||||||   ||||| |||||||||||||||  a
                       cuaug uuugaua   acguu uacagggguuaugua  u
aucggagaaaagggguauaauaa     u       cuu     u               aa

Annotation confidence Not enough data

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Genome context

chrX: 134595905-134596015 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from ggo-mir-450a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-450a

Accession	MIMAT0024237
Description	Gorilla gorilla ggo-miR-450a mature miRNA
Sequence	21 - UUUUGCGAUGUGUUCCUAAUA - 41
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116