miRBase entry: ggo-mir-1249

Stem-loop ggo-mir-1249


Accession
MI0020794
Description
Gorilla gorilla ggo-mir-1249 precursor miRNA
Gene family
MIPF0000667; mir-1249


Sequence

cauccugcuccucagauuauuguuggcauggggaggagggaggagaugggccaaguucccucuggcuggaACGCCCUUCCCCCCCUUCUUCAccuggcgaacuccuacucgu
....(((.....)))......(((.((..(((((((((((.((.((.((((...(((((........))))))))).)).))))))))))).))..)).)))..........

Structure
cauccugcuccucagauuauu   g  au  -         a  a  u    caa     cuc 
                     guu gc  gg ggaggaggg gg ga gggc   guucc   u
                     ||| ||  || ||||||||| || || ||||   |||||    
                     caa cg  cc CUUCUUCCC CC CU CCCG   CAagg   g
-----------ugcucauccu   g  gu  A         -  C  U    ---     ucg 


Annotation confidence Not enough data
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Genome context
chr22: 28768039-28768150 [-]

Database links

Mature ggo-miR-1249

Accession MIMAT0024247
Description Gorilla gorilla ggo-miR-1249 mature miRNA
Sequence 71 - ACGCCCUUCCCCCCCUUCUUCA - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116