Stem-loop ggo-mir-548d

Accession

MI0020836

Description

Gorilla gorilla ggo-mir-548d precursor miRNA

Gene family

MIPF0000317; mir-548

Literature search

1 open access papers mention ggo-mir-548d
(2 sentences)

Sequence

cauuucuauuagguuggugcaaaagugauugcaguguuugccaauaaaaguaaugaCAAAAACUGCAGUUACUUUUGcaccagcccaauauaugccaacagugaacaauc
......((((.((((((((((((((((((((((((.((((.((.((....)).)).)))).)))))))))))))))))))))))).))))....................

Structure

--------------cauuuc    a                        g    c  a  a 
                    uauu gguuggugcaaaagugauugcagu uuug ca ua a
                    |||| |||||||||||||||||||||||| |||| || ||  
                    auaa ccgaccacGUUUUCAUUGACGUCA AAAC gu au a
cuaacaagugacaaccguau    c                        A    a  a  g 

Annotation confidence Not enough data

Genome context

chr4: 87504315-87504424 [+]

Mature ggo-miR-548d

• Accession: MIMAT0024288
• Description: Gorilla gorilla ggo-miR-548d mature miRNA
• Sequence: 57 - CAAAAACUGCAGUUACUUUUG - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116