Stem-loop ggo-mir-378e

Accession

MI0020851

Description

Gorilla gorilla ggo-mir-378e precursor miRNA

Gene family

MIPF0000168; mir-378

Sequence

aaccuggcucugccugacuccagcguccaggccaggggcagacaguggacagagaacagugcccaagaccACUGGACUUGGAGUCAGGACaucauuuuaacagcuuuau
.....((((.(((((((((((((.((((((.....(((((....((.........))..))))).......))))))))))))))))).))..........))))....

Structure

aaccu    ---------c  -           c      --gccag     gaca  gga 
     ggcu          ug ccugacuccag guccag       gggca    gu   c
     ||||          || ||||||||||| ||||||       |||||    ||   a
     ucga          aC GGACUGAGGUU CAGGUC       cccgu    ca   g
-uauu    caauuuuacu  A           -      Accagaa     --ga  aga 

Annotation confidence Not enough data

Genome context

chr5: 154062553-154062661 [+]

Mature ggo-miR-378e

• Accession: MIMAT0024303
• Description: Gorilla gorilla ggo-miR-378e mature miRNA
• Sequence: 71 - ACUGGACUUGGAGUCAGGAC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116