miRBase entry: mml-mir-4446

Stem-loop mml-mir-4446


Accession
MI0020858
Description
Macaca mulatta mml-mir-4446 precursor miRNA
Gene family
MIPF0001385; mir-4446


Sequence

19304 reads, 129 reads per million, 9 experiments
uacuucaggauugaugaguccgguggcucugguCCAUUUCCCUGCCAUUCCCUUGGCuucaauuuacuccCAGGGCUGGCAGUGAGAUGGGucaaggcucacaccuucac
.......(((((....)))))(((((((.(((((((((((.((((((...((((((.............)))))).)))))).))))))))))).)))...)))).....

Structure
uacuucaggauugaugagucc    ---   c           C      UUC      Cuuca 
                     ggug   gcu ugguCCAUUUC CUGCCA   CCUUGG     a
                     ||||   ||| ||||||||||| ||||||   ||||||     u
                     ccac   cgg acuGGGUAGAG GACGGU   GGGACc     u
----------------cacuu    acu   a           U      --C      cucau 


Annotation confidence High
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Genome context
chr2: 34627123-34627232 [+]

Database links

Mature mml-miR-4446-3p

Accession MIMAT0024310
Description Macaca mulatta mml-miR-4446-3p mature miRNA
Sequence 71 - CAGGGCUGGCAGUGAGAUGGG - 91
Evidence experimental
Illumina [1-2]
Database links
Predicted targets

Mature mml-miR-4446-5p

Accession MIMAT0027105
Description Macaca mulatta mml-miR-4446-5p mature miRNA
Sequence 34 - CCAUUUCCCUGCCAUUCCCUUGGC - 57
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45