miRBase entry: mml-mir-873

Stem-loop mml-mir-873


Accession
MI0020859
Description
Macaca mulatta mml-mir-873 precursor miRNA
Gene family
MIPF0000390; mir-873


Sequence

3050 reads, 29 reads per million, 9 experiments
gaauaaguuugugugcauuuGCAGGAACUUGUGAGUCUCCuauugaaaaugaacaggAGACUGAUGAGUUCCCGGGAacacccacaaaucuuccuacucauuucuacugc
(((...(((((((.(..(((.(.(((((((((.((((((((.((.......)).)))))))).))))))))).).)))..).))))))).))).................

Structure
-----------------   uaa       u ca   G A         G        a  ga 
                 gaa   guuugug g  uuu C GGAACUUGU AGUCUCCu uu  a
                 |||   ||||||| |  ||| | ||||||||| |||||||| ||  a
                 cuu   uaaacac c  aAG G CCUUGAGUA UCAGAgga aa  a
cgucaucuuuacucauc   --c       c ac   G C         G        c  gu 


Annotation confidence High
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Genome context
chr15: 54963981-54964090 [+]

Database links

Mature mml-miR-873-5p

Accession MIMAT0024311
Description Macaca mulatta mml-miR-873-5p mature miRNA
Sequence 21 - GCAGGAACUUGUGAGUCUCC - 40
Evidence experimental
Illumina [1-2]
Database links
Predicted targets

Mature mml-miR-873-3p

Accession MIMAT0027106
Description Macaca mulatta mml-miR-873-3p mature miRNA
Sequence 58 - AGACUGAUGAGUUCCCGGGA - 77
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45