Stem-loop sequence mml-mir-1185-1

AccessionMI0020862 (change log)
DescriptionMacaca mulatta miR-1185-1 stem-loop
Gene family MIPF0000018; mir-154
Stem-loop 
   ------------ccgcucu       u    -     ga a                 uga 
5'                    uugguac ugaa gagag  u cccuuuguauguucacu   u
                      ||||||| |||| |||||  | |||||||||||||||||    
3'                    aacuaug guuu uucuc  a gggggacauauaagugg   u
   cgcggaaggggcugucuca       c    a     ag -                 uaa
Get sequence
Deep sequencing
2711 reads, 0 reads per million, 9 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Mmul_8.0.1; GCA_000772875.3) Overlapping transcripts
chr7: 163378194-163378303 [+]
intergenic
Clustered miRNAs
< 10kb from mml-mir-1185-1
mml-mir-495chr7: 163368266-163368347 [+]
mml-mir-376cchr7: 163373697-163373762 [+]
mml-mir-376a-2chr7: 163374075-163374154 [+]
mml-mir-654chr7: 163374225-163374305 [+]
mml-mir-376bchr7: 163374442-163374541 [+]
mml-mir-376a-1chr7: 163374788-163374855 [+]
mml-mir-1185-2chr7: 163376994-163377052 [+]
mml-mir-1185-1chr7: 163378194-163378303 [+]
mml-mir-381chr7: 163379925-163379999 [+]
mml-mir-487bchr7: 163380460-163380543 [+]
mml-mir-539chr7: 163381316-163381393 [+]
mml-mir-889chr7: 163381893-163381971 [+]
mml-mir-544chr7: 163382652-163382742 [+]
mml-mir-487achr7: 163386465-163386544 [+]
Database links

Mature sequence mml-miR-1185-5p

Accession MIMAT0024314
Sequence

21 -  

agaggauacccuuuguauguu

 - 41

Get sequence
Deep sequencing4832 reads, 9 experiments
Evidence experimental; Illumina [1]
Database links
Predicted targets

Mature sequence mml-miR-1185-3p

Accession MIMAT0027107
Sequence

60 -  

uauacagggggagacucuua

 - 79

Get sequence
Deep sequencing335 reads, 9 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:22453055 "Annotation of primate miRNAs by high throughput sequencing of small RNA libraries" Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J BMC Genomics. 13:116(2012).
2
PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).