miRBase entry: mml-mir-1185-1

Stem-loop mml-mir-1185-1


Accession
MI0020862
Description
Macaca mulatta mml-mir-1185-1 precursor miRNA
Gene family
MIPF0000018; mir-154


Sequence

2238 reads, 21 reads per million, 9 experiments
ccgcucuuugguacuugaagAGAGGAUACCCUUUGUAUGUUcacuugauuaauggugaaUAUACAGGGGGAGACUCUUAuuugcguaucaaacucugucggggaaggcgc
.((((.((((((((.(((((((((..(.(((((((((((((((((........))))))))))))))))))..))))).)))).))))))))(((....)))...)))).

Structure
c    ------------c        u    -     GA A                 uga 
 cgcu             uuugguac ugaa gAGAG  U CCCUUUGUAUGUUcacu   u
 ||||             |||||||| |||| |||||  | |||||||||||||||||    
 gcgg             aaacuaug guuu UUCUC  A GGGGGACAUAUaagugg   u
c    aaggggcugucuc        c    A     AG -                 uaa 


Annotation confidence High
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Genome context
chr7: 163378194-163378303 [+]
Clustered miRNAs
13 other miRNAs are < 10 kb from mml-mir-1185-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-1185-5p

Accession MIMAT0024314
Description Macaca mulatta mml-miR-1185-5p mature miRNA
Sequence 21 - AGAGGAUACCCUUUGUAUGUU - 41
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mml-miR-1185-3p

Accession MIMAT0027107
Description Macaca mulatta mml-miR-1185-3p mature miRNA
Sequence 60 - UAUACAGGGGGAGACUCUUA - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45