miRBase entry: mml-mir-1271

Stem-loop mml-mir-1271


Accession
MI0020863
Description
Macaca mulatta mml-mir-1271 precursor miRNA
Gene family
MIPF0000483; mir-1271


Sequence

681 reads, 7 reads per million, 9 experiments
ccccagcacccagaucagugCUUGGCACCUAGCAAGCACUCAguaaauacuuguugaGUGCCUGCUAUGUGCCGGGCAuugugcugagggcuuuguggggauccagagg
(((((((.(((((..(((((((((((((.(((((.(((((((((((....))))))))))).))))).)))))))))))))..))).))))....))))).........

Structure
---------     ----  a  -   au             C     A           a 
         cccca    gc cc cag  cagugCUUGGCAC UAGCA GCACUCAguaa u
         |||||    || || |||  ||||||||||||| ||||| |||||||||||  
         ggggu    cg gg guc  guuACGGGCCGUG AUCGU CGUGaguuguu a
ggagaccua     guuu  -  a   gu             U     C           c 


Annotation confidence High
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Genome context
chr6: 174823229-174823337 [+]

Database links

Mature mml-miR-1271-5p

Accession MIMAT0024315
Description Macaca mulatta mml-miR-1271-5p mature miRNA
Sequence 21 - CUUGGCACCUAGCAAGCACUCA - 42
Evidence experimental
Illumina [1-2]

Mature mml-miR-1271-3p

Accession MIMAT0027108
Description Macaca mulatta mml-miR-1271-3p mature miRNA
Sequence 58 - GUGCCUGCUAUGUGCCGGGCA - 78
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45