miRBase entry: mml-mir-3146

Stem-loop mml-mir-3146


Accession
MI0020884
Description
Macaca mulatta mml-mir-3146 precursor miRNA
Gene family
MIPF0001626; mir-3146


Sequence

120 reads, 2 reads per million, 9 experiments
acagagauacacguuuucuuugcuaaguccuuucuuucuauccuaguauaacuugaagaauucaaauaguCAUGCUAGAACAGAAAGAAUGGGaguuggcaagggaagaaga
.............(((((((((((((.((((((((((((...(((((((.(((((((...))))...))).)))))))...)))))))).)))).)))))))))))))....

Structure
acagagauacacg             g    -        auc       a   ---    g 
             uuuucuuugcuaa uccu uucuuucu   cuaguau acu   ugaa  
             ||||||||||||| |||| ||||||||   ||||||| |||   |||| a
             gaagggaacgguu aGGG AAGAAAGA   GAUCGUA uga   acuu  
---------agaa             g    U        CAA       C   uaa    a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 88490548-88490659 [+]

Database links

Mature mml-miR-3146

Accession MIMAT0024336
Description Macaca mulatta mml-miR-3146 mature miRNA
Sequence 71 - CAUGCUAGAACAGAAAGAAUGGG - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116