miRBase entry: mml-mir-519e

Stem-loop mml-mir-519e


Accession
MI0020901
Description
Macaca mulatta mml-mir-519e precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

164 reads, 30 reads per million, 5 experiments
gagaagaucucaugcagucaUUCUCCAAUGGGAAGCACCUUCuguggucugaaagcaagcagagggccuccuuuuggagcauuacuguuugagaguaaccacgucgaagu
.......(((((.(((((.((.((((((.((((.((.(((.((((.((......))..))))))))).)))).)))))).)).))))).)))))................

Structure
---------gagaaga     u     c  U      U    A  A   U    -g  cu 
                ucuca gcagu aU CUCCAA GGGA GC CCU Cugu  gu  g
                ||||| ||||| || |||||| |||| || ||| ||||  ||   
                agagu uguca ua gagguu uccu cg gga gacg  cg  a
ugaagcugcaccaaug     u     u  c      u    c  -   -    aa  aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr19: 49028305-49028414 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from mml-mir-519e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-519e

Accession MIMAT0024353
Description Macaca mulatta mml-miR-519e mature miRNA
Sequence 21 - UUCUCCAAUGGGAAGCACCUUC - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116