Stem-loop ppy-mir-320e

Accession

MI0020906

Description

Pongo pygmaeus ppy-mir-320e precursor miRNA

Gene family

MIPF0000163; mir-320

Sequence

ucaaaaaaaugaaaagacaagaaaauaccuccauagggccuucucuucccaguucuuccuggacucagggAAAAGCUGGGUUGAGAAGGUGAaaagaaaaaacaaaccuuga
.................((((......(((....)))((((((((..(((((((.((((((....))))))..)))))))..)))))))).................)))).

Structure

ucaaaaaaaugaaaaga    -aaaauaccuccauagg        uu       -c      g 
                 caag                 gccuucuc  cccaguu  uuccug a
                 ||||                 ||||||||  |||||||  ||||||  
                 guuc                 UGGAAGAG  GGGUCGA  Agggac c
----------------a    caaacaaaaaagaaaAG        UU       AA      u 

Annotation confidence Not enough data

Genome context

chr19: 48078864-48078975 [-]

Mature ppy-miR-320e

• Accession: MIMAT0024358
• Description: Pongo pygmaeus ppy-miR-320e mature miRNA
• Sequence: 71 - AAAAGCUGGGUUGAGAAGGUGA - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116