miRBase entry: ppy-mir-378b

Stem-loop ppy-mir-378b


Accession
MI0020912
Description
Pongo pygmaeus ppy-mir-378b precursor miRNA
Gene family
MIPF0000168; mir-378


Sequence

gccucaguuuccuccacugaagaaugggaggaggcuggucauugagucuucaaggcuaguggaaagagcACUGGACUUGGAGGCAGAAAGacccaacuugcguccuggc
(((.(((((((((((.(........))))))))))))(((.((..(((((((((.((((((.......)))))).)))))))))..)).)))..............)))

Structure
   ucaguuuccuccacugaagaaugggaggaggcug   a  ga         g      ga 
gcc                                  guc uu  gucuucaag cuagug  a
|||                                  ||| ||  ||||||||| ||||||  a
cgg                                  caG AA  CGGAGGUUC GGUCAc  g
   --------------------uccugcguucaacc   A  GA         A      ga 


Annotation confidence Not enough data
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Genome context
chr3: 59587304-59587412 [-]

Database links

Mature ppy-miR-378b

Accession MIMAT0024364
Description Pongo pygmaeus ppy-miR-378b mature miRNA
Sequence 70 - ACUGGACUUGGAGGCAGAAAG - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116