Stem-loop ppy-mir-4743

Accession

MI0020914

Description

Pongo pygmaeus ppy-mir-4743 precursor miRNA

Gene family

MIPF0001384; mir-4743

Sequence

aacugccucuccucuccuccUGGCCGGAUGGGACAGGAGGCAcgaaugagccaucuuuccaaugccuuucugucuuuucugguccagguguggcaaagggaagcuggaa
....((.((.(((.(((.((((((((((.(((((((((((((.(((.((....)).)))...)))).))))))))).))))).)))))...)).).))))).)).....

Structure

-aacu  c  u   c -  --u     -     U         -    --c   u  g 
     gc uc ccu u cc   ccUGG CCGGA GGGACAGGA GGCA   gaa ga c
     || || ||| | ||   ||||| ||||| ||||||||| ||||   ||| ||  
     cg ag gga a gg   ggacc ggucu uucugucuu ccgu   cuu cu c
aaggu  a  -   a c  ugu     u     u         u    aac   u  a 

Annotation confidence Not enough data

Genome context

chr18: 61037321-61037429 [+]

Mature ppy-miR-4743

• Accession: MIMAT0024366
• Description: Pongo pygmaeus ppy-miR-4743 mature miRNA
• Sequence: 21 - UGGCCGGAUGGGACAGGAGGCA - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116