Stem-loop ppy-mir-1260b

Accession

MI0020918

Description

Pongo pygmaeus ppy-mir-1260b precursor miRNA

Gene family

MIPF0001381; mir-1260b

Sequence

guggcugcugcucuccguuuAUCCCACCACUGCCACCAuuauugcuacuguucagcaggugcugcugguggugauggugauagucuggugggggcaguggggcugcug
((((((((((((..........((((((((((.((((((((((((.......((((((...)))))))))))))))))).))))..))))))))))))..))))))..

Structure

--      --      cuccguuuAU      --    C            uacuguu      g 
  guggcu  gcugcu          CCCACC  ACUG CACCAuuauugc       cagcag  
  ||||||  ||||||          ||||||  |||| ||||||||||||       |||||| u
  cgucgg  ugacgg          gggugg  ugau gugguaguggug       gucguc  
gu      gg      ----------      uc    a            -------      g 

Annotation confidence Not enough data

Genome context

chr11: 92376386-92376493 [+]

Mature ppy-miR-1260b

• Accession: MIMAT0024370
• Description: Pongo pygmaeus ppy-miR-1260b mature miRNA
• Sequence: 21 - AUCCCACCACUGCCACCA - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116