miRBase entry: ppy-mir-4798

Stem-loop ppy-mir-4798


Accession
MI0020922
Description
Pongo pygmaeus ppy-mir-4798 precursor miRNA
Gene family
MIPF0001574; mir-4798


Sequence

gcauaauaauaaaguacaacUUCGGUAUACUUUGUGAAUUGGcuuuuacaaaagaccaaaacaugaaguauacugaagucguacuuuauuacaacuaaaaaugguuugugaa
......(((((((((((.((((((((((((((((((..((((((((....)))).))))..)))))))))))))))))).))))))))))).(((((....)))))......

Structure
---------------gcauaa           a                  AA    -    u 
                     uaauaaaguac acUUCGGUAUACUUUGUG  UUGG cuuu a
                     ||||||||||| ||||||||||||||||||  |||| ||||  
                     auuauuucaug ugaagucauaugaaguac  aacc gaaa c
aaguguuugguaaaaaucaac           c                  aa    a    a 


Annotation confidence Not enough data
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Genome context
chr4: 5728493-5728604 [-]

Database links

Mature ppy-miR-4798

Accession MIMAT0024374
Description Pongo pygmaeus ppy-miR-4798 mature miRNA
Sequence 21 - UUCGGUAUACUUUGUGAAUUGG - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116