miRBase entry: ppy-mir-4667

Stem-loop ppy-mir-4667


Accession
MI0020934
Description
Pongo pygmaeus ppy-mir-4667 precursor miRNA
Gene family
MIPF0001390; mir-4667


Sequence

ccuagagguugagguucUGACUGGGGAGCAGAAGGAGAacccaagaaaagcugacuuggaggucccuccuucuguccccacaggacuuuggccuggaugugccugcuuuccg
.....((((((((((((((..((((((.(((((((((..((((((.........))))).)....)))))))))))))))))))))))))))))(((.((....))..))).

Structure
-------------ccuag              AC      G         --Aa -     aaa 
                  agguugagguucUG  UGGGGA CAGAAGGAG    c ccaag   a
                  ||||||||||||||  |||||| |||||||||    | |||||   g
                  uccgguuucaggac  accccu gucuuccuc    g gguuc   c
gccuuucguccguguagg              --      -         ccug a     agu 


Annotation confidence Not enough data
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Genome context
chr9: 25952504-25952615 [-]

Database links

Mature ppy-miR-4667

Accession MIMAT0024386
Description Pongo pygmaeus ppy-miR-4667 mature miRNA
Sequence 18 - UGACUGGGGAGCAGAAGGAGA - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116