Stem-loop ppy-mir-3912

Accession

MI0020935

Description

Pongo pygmaeus ppy-mir-3912 precursor miRNA

Gene family

MIPF0001601; mir-3912

Sequence

gucuaucaagagaugaaugaacaguuaaguuauaacauguccauauuaugcguuaguuguggacacauacUAACGCAUAAUAUGGACAUGuuauaauuuaacuguuccuuu
((((......))))....(((((((((((((((((((((((((((((((((((((((.(((....))))))))))))))))))))))))))))))))))))))))))....

Structure

gucuaucaagagaugaau                                       u   g 
                  gaacaguuaaguuauaacauguccauauuaugcguuagu gug a
                  ||||||||||||||||||||||||||||||||||||||| |||  
                  cuugucaauuuaauauuGUACAGGUAUAAUACGCAAUca uac c
--------------uuuc                                       -   a 

Annotation confidence Not enough data

Genome context

chr5: 173988397-173988507 [-]

Mature ppy-miR-3912

• Accession: MIMAT0024387
• Description: Pongo pygmaeus ppy-miR-3912 mature miRNA
• Sequence: 71 - UAACGCAUAAUAUGGACAUG - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116