Stem-loop ppy-mir-4529

Accession

MI0020940

Description

Pongo pygmaeus ppy-mir-4529 precursor miRNA

Gene family

MIPF0001451; mir-4529

Sequence

cacauauaaauaacuuucccagugacaggccaucagcagaccaaggacaacauugggucuucaugucuucAUUGGACUGCUGAUGGCCUGucauuggggaaguuauuuac
......(((((((((((((((((((((((((((((((((.((((.((..((((.((....))))))..)).)))).))))))))))))))))))))))))))))))))).

Structure

cacaua                                 a    g  ca    u  g 
      uaaauaacuuucccagugacaggccaucagcag ccaa ga  acau gg u
      ||||||||||||||||||||||||||||||||| |||| ||  |||| ||  
      auuuauugaagggguuacuGUCCGGUAGUCGUC GGUU cu  ugua cu c
-----c                                 A    A  uc    -  u 

Annotation confidence Not enough data

Genome context

chr18: 68164347-68164456 [-]

Mature ppy-miR-4529

• Accession: MIMAT0024392
• Description: Pongo pygmaeus ppy-miR-4529 mature miRNA
• Sequence: 71 - AUUGGACUGCUGAUGGCCUG - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116