miRBase entry: ppy-mir-151b

Stem-loop ppy-mir-151b


Accession
MI0020942
Description
Pongo pygmaeus ppy-mir-151b precursor miRNA


Sequence

ucaccagacaccucugaugugucagucucucuucagggcucccgagacacagaaacagacaccugcccUCCAGGAGCUCACAGUCUAGacaaacgaacccaggguccaaa
.........(((.(((...(((..((((.......(((((((.(((...(((..........)))..)))..))))))).......))))..)))....)))))).....

Structure
ucaccagac   u   -aug   ca    cucuuca       -c   aca   aaac 
         acc cug    ugu  gucu       gggcucc  gag   cag    a
         ||| |||    |||  ||||       |||||||  |||   |||     
         ugg gac    gca  caGA       CUCGAGG  CUc   guc    g
----aaacc   -   ccaa   aa    UCUGACA       AC   -cc   caca 


Annotation confidence Not enough data
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Genome context
chr14: 101636045-101636154 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-mir-151b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-151b

Accession MIMAT0024394
Description Pongo pygmaeus ppy-miR-151b mature miRNA
Sequence 69 - UCCAGGAGCUCACAGUCUAG - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116