miRBase entry: ppy-mir-4672

Stem-loop ppy-mir-4672


Accession
MI0020946
Description
Pongo pygmaeus ppy-mir-4672 precursor miRNA
Gene family
MIPF0001551; mir-4672


Sequence

cagucugacgccggaggucaggcugcuucucgccucuguccagcuguguggccuuggacaagccucuuggucACACAGCUGGACAGAGGGACGAaacagccugaccugagaggc
.........(((..(((((((((((.(((((.(((((((((((((((((((((..(((......))).))))))))))))))))))))))).))).)))))))))))....)))

Structure
cagucugac   --gg           c   -  g                     uu   ca 
         gcc    aggucaggcug uuc uc ccucuguccagcuguguggcc  gga  a
         |||    ||||||||||| ||| || |||||||||||||||||||||  |||   
         cgg    uccaguccgac aAG AG GGAGACAGGUCGACACAcugg  ucu  g
---------   agag           a   C  -                     -u   cc 


Annotation confidence Not enough data
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Genome context
chr9: 124789338-124789451 [-]

Database links

Mature ppy-miR-4672

Accession MIMAT0024398
Description Pongo pygmaeus ppy-miR-4672 mature miRNA
Sequence 73 - ACACAGCUGGACAGAGGGACGA - 94
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116