Stem-loop ppy-mir-3145

Accession

MI0020951

Description

Pongo pygmaeus ppy-mir-3145 precursor miRNA

Gene family

MIPF0001427; mir-3145

Sequence

guauuuguuuauaugaguucAACUCCAAGCAUUCAAAACUCAuuguugaauggaaugagguauuuugaguguuuggaauugaacucguauacacugauacaccaauaccagu
(((((.((.(((((((((((((.(((((((((((((((((((((.(.....).))))))...))))))))))))))).))))))))))))).)).)))))............

Structure

------------     u  u             C               ---      g u 
            guauu gu uauaugaguucAA UCCAAGCAUUCAAAA   CUCAuu u g
            ||||| || ||||||||||||| |||||||||||||||   |||||| | a
            cauag ca auaugcucaaguu agguuugugaguuuu   gaguaa g a
ugaccauaacca     u  c             a               aug      g u 

Annotation confidence Not enough data

Genome context

NW_002927458.1: 63680-63791 [-]

Mature ppy-miR-3145

• Accession: MIMAT0024403
• Description: Pongo pygmaeus ppy-miR-3145 mature miRNA
• Sequence: 21 - AACUCCAAGCAUUCAAAACUCA - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116