Stem-loop mes-MIR399a

Accession

MI0020967

Description

Manihot esculenta mes-MIR399a precursor miRNA

Gene family

MIPF0000015; MIR399

Literature search

6 open access papers mention mes-MIR399a
(8 sentences)

Sequence

auggucgaggaauggcaggcgacucucccuuggcaaacggaugaugaucacuauucaccaugcaaauuaaugcauaaucugcuuUGCCAAAGGAGAAUUGCCCUGccauuucuaauaucau
(((((..(((((((((((((((.(((((.((((((((((((((.(((.......))).)(((((......))))).))))).)))))))).))))).))).))))))))))))...)))))

Structure

     -cg            -   c     c        -     gaugaucacuauucacc     aa 
auggu   aggaauggcagg cga ucucc uuggcaaa cggau                 augca  u
|||||   |||||||||||| ||| ||||| |||||||| |||||                 |||||   
uacua   ucuuuaccGUCC GUU AGAGG AACCGUuu gucua                 uacgu  u
     uaa            C   A     A        c     ----------------a     aa 

Annotation confidence Not enough data

Genome context

scaffold04003: 143-263 [+]

Mature mes-miR399a

• Accession: MIMAT0024418
• Description: Manihot esculenta mes-miR399a mature miRNA
• Sequence: 85 - UGCCAAAGGAGAAUUGCCCUG - 105
• Evidence: not_experimental

References

1. Overview of the potential of microRNAs and their target gene detection for cassava (Manihot esculenta) improvement
   "Amiteye S, Corral JM, Sharbel TF"
   African J Biotech. (2011) 10:2562-2573