miRBase entry: mse-let-7a

Stem-loop mse-let-7a

Accession

MI0020986

Description

Manduca sexta mse-let-7a precursor miRNA

Gene family

MIPF0000002; let-7

Sequence

gagagagugccgucggugcggUGAGGUAGUAGGUUGUAUAGuacugcauuacaacauuugggagggacuguauagccugcuaacuuuccggaccgccggccg
......(.((((.((((.(((.(((.((((((((((((((((.((.(.............).))..)))))))))))))))).))).))).)))).))))).

Structure

gagaga u    u    g   U   G                -a  g auuac 
      g gccg cggu cgg GAG UAGUAGGUUGUAUAGu  cu c     a
      | |||| |||| ||| ||| ||||||||||||||||  || |     a
      c cggc gcca gcc uuc aucguccgauauguca  ga g     c
-----g -    c    g   u   a                gg  g guuua

Annotation confidence Not enough data

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Genome context

JH668494.1: 417402-417503 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-let-7a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mse-let-7a

Accession	MIMAT0024437
Description	Manduca sexta mse-let-7a mature miRNA
Sequence	22 - UGAGGUAGUAGGUUGUAUAG - 41
Evidence	experimental Illumina [1]

References

PubMed ID: 22406339
Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
"Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
"Insect Biochem Mol Biol (2012) 42:381-395