Stem-loop mse-mir-193

Accession

MI0020988

Description

Manduca sexta mse-mir-193 precursor miRNA

Gene family

MIPF0000082; mir-193

Sequence

uccugaugcucaacuucggcgagggucuuggcggucuggucgguuuauaguuccUACUGGCCUGCUAAGUCCCAAGccgcggugagucguuccuguaaaca
....((((((((.((.((((..(((.((((((((.(((((.((.........)).))))).)))))))).)))..)))).)))))).))))..........

Structure

------uccu    -    a  u    ga   u        u     c  uuu 
          gaug cuca cu cggc  ggg cuuggcgg cuggu gg   a
          |||| |||| || ||||  ||| |||||||| ||||| ||   u
          uugc gagu gg gccG  CCC GAAUCGUC GGUCA cc   a
acaaaugucc    u    -  c    AA   U        C     U  uug 

Annotation confidence Not enough data

Genome context

JH668475.1: 209779-209879 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-mir-193

Mature mse-miR-193

• Accession: MIMAT0024439
• Description: Manduca sexta mse-miR-193 mature miRNA
• Sequence: 55 - UACUGGCCUGCUAAGUCCCAAG - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22406339
   Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
   "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
   "Insect Biochem Mol Biol (2012) 42:381-395