miRBase entry: mse-mir-281

Stem-loop mse-mir-281


Accession
MI0020995
Description
Manduca sexta mse-mir-281 precursor miRNA
Gene family
MIPF0000087; mir-46


Sequence

gaaauaagaagcauauaaucuguuaaugaagagagcuauccgucgacaguauugccacuaaacaCUGUCAUGGAGUUGCUCUCUUUaugaacggaugcaa
..........(((.....((((((.(((((((((((..(((((.((((((.((.......)).)))))))))))...))))))))))).)))))))))..

Structure
gaaauaagaa   uauaa      a           -ua     c      a  gc 
          gca     ucuguu augaagagagc   uccgu gacagu uu  c
          |||     |||||| |||||||||||   ||||| |||||| ||  a
          cgu     aggcaa uaUUUCUCUCG   AGGUA CUGUCa aa  c
--------aa   -----      g           UUG     -      c  au 


Annotation confidence Not enough data
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Genome context
JH668342.1: 1204825-1204924 [+]

Database links

Mature mse-miR-281

Accession MIMAT0024446
Description Manduca sexta mse-miR-281 mature miRNA
Sequence 65 - CUGUCAUGGAGUUGCUCUCUUU - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22406339
    Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
    "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
    "Insect Biochem Mol Biol (2012) 42:381-395