Stem-loop mse-mir-278

Accession

MI0021000

Description

Manduca sexta mse-mir-278 precursor miRNA

Gene family

MIPF0000155; mir-278

Sequence

agaacaguaucaagugcuacgcccggacgaacuucccaguucggccgacauuaaacgggUCGGUGGGAUCUUCGUCCGUUUguaucgcuuauacguauuucg
.(((..((((.(((((.((((..((((((((..(((((..((((((...........)))))))))))..))))))))..)))).)))))))))....))).

Structure

a   --ca    c     c    cc        cu     gu      gaca 
 gaa    guau aagug uacg  cggacgaa  uccca  ucggcc    u
 |||    |||| ||||| ||||  ||||||||  |||||  ||||||    u
 cuu    caua uucgc augU  GCCUGCUU  AGGGU  GGCUgg    a
g   uaug    -     u    UU        CU     --      gcaa 

Annotation confidence Not enough data

Genome context

JH668429.1: 112880-112981 [-]

Mature mse-miR-278

• Accession: MIMAT0024451
• Description: Manduca sexta mse-miR-278 mature miRNA
• Sequence: 60 - UCGGUGGGAUCUUCGUCCGUUU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22406339
   Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
   "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
   "Insect Biochem Mol Biol (2012) 42:381-395