miRBase entry: mse-mir-12

Stem-loop mse-mir-12


Accession
MI0021015
Description
Manduca sexta mse-mir-12 precursor miRNA
Gene family
MIPF0000181; mir-12


Sequence

uugucacguucaucguacaguagaagaguagagauuugaagacgucguuaaugccgcaccgucucUGAGUAUUACUUCAGGUACUGGUuguauuguggaaacg
...(((((.....((..(((((...((((((..(((((.(((((.((.......))...))))).))))).))))))....)))))..))...))))).....

Structure
--uug     uucau  ua     -gaa      ag     a     --u  uu 
     ucacg     cg  cagua    gaguag  auuug agacg   cg  a
     |||||     ||  |||||    ||||||  ||||| |||||   ||  a
     ggugu     gu  GUCAU    UUCAUU  UGAGU ucugc   gc  u
gcaaa     --uau  UG     GGAC      -A     c     cac  cg 


Annotation confidence Not enough data
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Genome context
AIXA01025866.1: 313-415 [-]

Database links

Mature mse-miR-12

Accession MIMAT0024466
Description Manduca sexta mse-miR-12 mature miRNA
Sequence 66 - UGAGUAUUACUUCAGGUACUGGU - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22406339
    Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
    "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
    "Insect Biochem Mol Biol (2012) 42:381-395