Stem-loop mse-mir-79

Accession

MI0021021

Description

Manduca sexta mse-mir-79 precursor miRNA

Gene family

MIPF0000014; mir-9

Sequence

cgcagacgagcgcgaugcgacgcuuuggcgauuuagcuccgugacgugaagcauacucAUAAAGCUAGAUUACCAAAGCAccgcgucccgccacucaucggugg
(((.((.(((((.((((((..(((((((.(((((((((..((((.(((.....)))))))..))))))))).)))))))..)))))).)))...)).)).))).

Structure

-   a  c  ---   c      ac       c         cc    c   a 
 cgc ga ga   gcg gaugcg  gcuuugg gauuuagcu  guga gug a
 ||| || ||   ||| ||||||  ||||||| |||||||||  |||| ||| g
 gug cu cu   cgc cugcgc  CGAAACC UUAGAUCGA  UAcu cau c
g   g  a  cac   c      cA       A         AA    -   a 

Annotation confidence Not enough data

Genome context

JH668930.1: 82368-82471 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mse-mir-79

Mature mse-miR-79

• Accession: MIMAT0024472
• Description: Manduca sexta mse-miR-79 mature miRNA
• Sequence: 59 - AUAAAGCUAGAUUACCAAAGCA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22406339
   Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
   "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
   "Insect Biochem Mol Biol (2012) 42:381-395