Stem-loop mse-mir-2a

Accession

MI0021029

Description

Manduca sexta mse-mir-2a precursor miRNA

Gene family

MIPF0000049; mir-2

Sequence

aagaauucaaugaggcccugccaucaaagucggcuugucauagaucauugcgaagcuaUCACAGCCAGCUUUGAUGAGCAcggccccauguguaugucc
.........(((.((((.((((((((((((.((((.((.((((.((.....))..)))).)))))).))))))))).))).)))).)))..........

Structure

-aagaauuca   a    c   -         c    u  c    -a  a 
          aug ggcc ugc caucaaagu ggcu gu auag  uc u
          ||| |||| ||| ||||||||| |||| || ||||  || u
          uac ccgg ACG GUAGUUUCG CCGA CA Uauc  ag g
ccuguaugug   c    c   A         A    -  C    ga  c 

Annotation confidence Not enough data

Genome context

JH668296.1: 1650050-1650148 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-mir-2a

Mature mse-miR-2a

• Accession: MIMAT0024479
• Description: Manduca sexta mse-miR-2a mature miRNA
• Sequence: 59 - UCACAGCCAGCUUUGAUGAGCA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22406339
   Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
   "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
   "Insect Biochem Mol Biol (2012) 42:381-395