Stem-loop mse-mir-306

Accession

MI0021036

Description

Manduca sexta mse-mir-306 precursor miRNA

Sequence

cgcgcgaguacacaguuguuucagugcgcccggacggcggcaguacgacggcgggacacgcgccguggccgccUCAGGUACUAGGUGACUCUGAguggcgu
.((((.(.(.((.((((((((.(((((.....((.((((((....(.((((((.(...).)))))))))))))))..))))))))))))).))).).))))

Structure

c    g g a  c        c     gcccg  c      agua g      g a 
 gcgc a u ca aguuguuu agugc     ga ggcggc    c acggcg g  
 |||| | | || |||||||| |||||     || ||||||    | |||||| | c
 ugcg u A GU UCAGUGGA UCAUG     CU ccgccg    g ugccgc c  
-    g g -  C        -     ---GA  -      ---- -      g a 

Annotation confidence Not enough data

Genome context

JH668930.1: 82546-82646 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mse-mir-306

Mature mse-miR-306

• Accession: MIMAT0024486
• Description: Manduca sexta mse-miR-306 mature miRNA
• Sequence: 74 - UCAGGUACUAGGUGACUCUGA - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22406339
   Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
   "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
   "Insect Biochem Mol Biol (2012) 42:381-395