miRBase entry: mse-mir-92b

Stem-loop mse-mir-92b

Accession

MI0021037

Description

Manduca sexta mse-mir-92b precursor miRNA

Gene family

MIPF0000013; mir-25

Sequence

ucacugcgguggccacgcuuaggucgcgauuagguguaaacguugugucuguuaaucaAAUUGCACCAAUCCCGGCCUGCuuguggucgccaugccgcguga
((((.((((((((((((..(((((((.((((.(((((((...(((...........))).))))))))))).)))))))..))))))).....)))))))))

Structure

    u     -----       cu       c    a       acg   uguc 
ucac gcggu     ggccacg  uaggucg gauu gguguaa   uug    u
|||| |||||     |||||||  ||||||| |||| |||||||   |||    g
agug cgccg     cuggugu  GUCCGGC CUAA CCACGUU   Aac    u
    -     uaccg       uC       C    -       --A   uaau

Annotation confidence Not enough data

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Genome context

JH669151.1: 7429-7530 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-mir-92b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mse-miR-92b

Accession	MIMAT0024487
Description	Manduca sexta mse-miR-92b mature miRNA
Sequence	59 - AAUUGCACCAAUCCCGGCCUGC - 80
Evidence	experimental Illumina [1]

References

PubMed ID: 22406339
Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
"Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
"Insect Biochem Mol Biol (2012) 42:381-395