miRBase entry: mse-mir-10b-1

Stem-loop mse-mir-10b-1


Accession
MI0021040
Description
Manduca sexta mse-mir-10b-1 precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

cgcgaggucguugcaucgacgucacugcucggucugcacgguggccagucgguugugcgcUACCCUGUAGAUCCGCGCCGUGAAaaaaaauguaucaacccgca
.(((.(((.(.(((((.....((((.((.(((((((((.((((((((........)).)))))).)))))).))).)).))))......))))).).)))))).

Structure
c   a   c u     -cgacg    u  u   -      c      -  guc 
 gcg ggu g ugcau      ucac gc cgg ucugca gguggc ca   g
 ||| ||| | |||||      |||| || ||| |||||| |||||| ||    
 cgc cca c augua      AGUG CG GCC AGAUGU CCAUcg gu   g
a   -   a u     aaaaaA    C  C   U      C      c  guu 


Annotation confidence Not enough data
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Genome context
JH668509.1: 440703-440806 [-]

Database links

Mature mse-miR-10b

Accession MIMAT0024490
Description Manduca sexta mse-miR-10b mature miRNA
Sequence 61 - UACCCUGUAGAUCCGCGCCGUGAA - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22406339
    Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
    "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
    "Insect Biochem Mol Biol (2012) 42:381-395