miRBase entry: mse-mir-2797a

Stem-loop mse-mir-2797a

Accession

MI0021049

Description

Manduca sexta mse-mir-2797a precursor miRNA

Gene family

MIPF0000911; mir-2797

Sequence

ucggaaucaaucuguuucgugagcUUAAGUAGAUUCUAUUUGGCUAuguuuaauuauucaagccggauugaguuuacuuauucuuacgacagacaauuaggcgau
(((.......((((..(((((((..(((((((((((.((((((((.((..........)))))))))).)))))))))))..)))))))))))........))).

Structure

-   -gaaucaa    uu       cU           U        A  uuua 
 ucg        ucug  ucgugag  UAAGUAGAUUC AUUUGGCU ug    a
 |||        ||||  |||||||  ||||||||||| |||||||| ||     
 agc        agac  agcauuc  auucauuugag uaggccga ac    u
u   ggauuaac    --       uu           u        -  uuau

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

AIXA01017703.1: 2330-2434 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-mir-2797a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mse-miR-2797a

Accession	MIMAT0024499
Description	Manduca sexta mse-miR-2797a mature miRNA
Sequence	25 - UUAAGUAGAUUCUAUUUGGCUA - 46
Evidence	experimental Illumina [1]

References

PubMed ID: 22406339
Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
"Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
"Insect Biochem Mol Biol (2012) 42:381-395