miRBase entry: mse-mir-2797b

Stem-loop mse-mir-2797b


Accession
MI0021050
Description
Manduca sexta mse-mir-2797b precursor miRNA
Gene family
MIPF0000911; mir-2797


Sequence

acaugaagagcaagccaaauuuuguugaugauaUAAGUAGAUACUUCUAGGCUUUguuuuuuauuaaagccuaaaaaugucuacuaguauuauugguaaaac
...................(((((((((((((((.((((((((.((.(((((((((........))))))))).)).)))))))).))))))))))))))).

Structure
acaugaagagcaagccaaa               A        C  C         uuu 
                   uuuuguugaugauaU AGUAGAUA UU UAGGCUUUg   u
                   ||||||||||||||| |||||||| || |||||||||    
                   aaaaugguuauuaug ucaucugu aa auccgaaau   u
------------------c               a        a  a         uau 


Annotation confidence Not enough data
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Genome context
AIXA01017703.1: 1413-1514 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mse-mir-2797b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mse-miR-2797b

Accession MIMAT0024500
Description Manduca sexta mse-miR-2797b mature miRNA
Sequence 34 - UAAGUAGAUACUUCUAGGCUUU - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22406339
    Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
    "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
    "Insect Biochem Mol Biol (2012) 42:381-395