miRBase entry: mse-mir-6095-2

Stem-loop mse-mir-6095-2

Accession

MI0021054

Description

Manduca sexta mse-mir-6095-2 precursor miRNA

Gene family

MIPF0001433; mir-6095

Sequence

cauaguacaacauuacaugguauaacacuaguauguccauuuccaugucaugauuugcacgaCAUAGAAAUGAACAUAUUGUUGAcauauuauguauuuacuc
.............((((((((((..((.((((((((.((((((.(((((.((.....)).))))).)))))).)))))))).))..)))))))))).......

Structure

cauaguacaacau          aa  c        c      c     a  a 
             uacaugguau  ca uaguaugu cauuuc auguc ug u
             ||||||||||  || |||||||| |||||| ||||| || u
             auguauuaua  GU GUUAUACA GUAAAG UACag ac u
------cucauuu          cA  U        A      A     c  g

Annotation confidence Not enough data

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Genome context

JH668503.1: 87566-87668 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mse-mir-6095-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mse-miR-6095

Accession	MIMAT0024503
Description	Manduca sexta mse-miR-6095 mature miRNA
Sequence	63 - CAUAGAAAUGAACAUAUUGUUGA - 85
Evidence	experimental Illumina [1]

References

PubMed ID: 22406339
Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
"Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
"Insect Biochem Mol Biol (2012) 42:381-395