Stem-loop mse-mir-6096-3

Accession

MI0021058

Description

Manduca sexta mse-mir-6096-3 precursor miRNA

Gene family

MIPF0001436; mir-6096

Sequence

cgagugcuacacaggacaucauugucgguggccugacucauaauaauuggaucauguugucaAAUAUUAUGAGGUCGGUCAACGacaguggcgaucaauaguu
.....((((.....(((.(((((((((.(((((.(((((((((((.((((.........)))).)))))))).)))))))).))))))))).).))..)))).

Structure

cgagu    cacag  - a         g     u   -        a    auc 
     gcua     ga c ucauugucg uggcc gac ucauaaua uugg   a
     ||||     || | ||||||||| ||||| ||| |||||||| ||||   u
     ugau     cu g ggugacaGC ACUGG CUG AGUAUUAU Aacu   g
----u    ---aa  a c         A     -   G        A    guu 

Annotation confidence Not enough data

Genome context

JH668713.1: 211478-211580 [+]

Mature mse-miR-6096

• Accession: MIMAT0024504
• Description: Manduca sexta mse-miR-6096 mature miRNA
• Sequence: 63 - AAUAUUAUGAGGUCGGUCAACG - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22406339
   Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
   "Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
   "Insect Biochem Mol Biol (2012) 42:381-395