Stem-loop cca-MIR156a

Accession

MI0021064

Description

Cynara cardunculus cca-MIR156a precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

4 open access papers mention cca-MIR156a
(11 sentences)

Sequence

UGACAGAAGAGAGUGAGCACagaugggcuuuucuugcaugauauuggagggagguguacuagaugaugauuuguaugcuugaaacuaugugugcucacucucuauccgucacccaccu
((((.((((((((((((((((.((((....(((((.((......)).)))))(((((((.((((....))))))))))).....)))).)))))))))))))).)).)))).......

Structure

-------    A  -              g    gcuuuucuugcaugauauuggaggga       u    g 
       UGAC GA AGAGAGUGAGCACa augg                          gguguac agau a
       |||| || |||||||||||||| ||||                          ||||||| ||||  
       acug cu ucucucacucgugu uauc                          ucguaug uuua u
uccaccc    c  a              g    ---------------------aaagu       -    g 

Annotation confidence Not enough data

Genome context

Unknown

Mature cca-miR156a

• Accession: MIMAT0024510
• Description: Cynara cardunculus cca-miR156a mature miRNA
• Sequence: 1 - UGACAGAAGAGAGUGAGCAC - 20
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22272770
   The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
   De Paola D, Cattonaro F, Pignone D, Sonnante G
   BMC Genomics (2012) 13:41