Stem-loop cca-MIR156b

Accession

MI0021065

Description

Cynara cardunculus cca-MIR156b precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

4 open access papers mention cca-MIR156b
(11 sentences)

Sequence

aagaaagcUGACAGAAGAGAGUGAGCAUAugcaaagcaauuguauagagaacuauacacuuguuggacuuaugcgugugcucacuucucuugcugucagcua
.....((((((((((((((((((((((((((((((((((((((((((....)))))))...))))..))).))))))))))))).)))))).))))))))).

Structure

aagaa         -      -             -   --    ---       a 
     agcUGACAG AAGAGA GUGAGCAUAugca aag  caau   uguauag g
     ||||||||| |||||| ||||||||||||| |||  ||||   |||||||  
     ucgacuguc uucucu cacucgugugcgu uuc  guug   acauauc a
----a         g      u             a   ag    uuc       a 

Annotation confidence Not enough data

Genome context

Unknown

Mature cca-miR156b

• Accession: MIMAT0024511
• Description: Cynara cardunculus cca-miR156b mature miRNA
• Sequence: 9 - UGACAGAAGAGAGUGAGCAUA - 29
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22272770
   The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
   De Paola D, Cattonaro F, Pignone D, Sonnante G
   BMC Genomics (2012) 13:41