Stem-loop cca-MIR160b

Accession

MI0021068

Description

Cynara cardunculus cca-MIR160b precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

3 open access papers mention cca-MIR160b
(3 sentences)

Sequence

agcauaUGCCUGGCUCCCUGUAUGCCAuuugcaaagcguaucgacauaucgauggucuauguggauggcguaugcggagccaagcauguuccg
...((((((.(((((((.(((((((((((((((.((..((((((....))))))..)).))))))))))))))).))))))).))))))....

Structure

-agc      C       C               a  cg      c 
    auaUGC UGGCUCC UGUAUGCCAuuugca ag  uaucga a
    |||||| ||||||| ||||||||||||||| ||  ||||||  
    uguacg accgagg guaugcgguaggugu uc  guagcu u
gccu      a       c               a  ug      a 

Annotation confidence Not enough data

Genome context

Unknown

Mature cca-miR160b

• Accession: MIMAT0024514
• Description: Cynara cardunculus cca-miR160b mature miRNA
• Sequence: 7 - UGCCUGGCUCCCUGUAUGCCA - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22272770
   The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
   De Paola D, Cattonaro F, Pignone D, Sonnante G
   BMC Genomics (2012) 13:41