Stem-loop cca-MIR164

Accession

MI0021069

Description

Cynara cardunculus cca-MIR164 precursor miRNA

Gene family

MIPF0000045; MIR164

Literature search

4 open access papers mention cca-MIR164
(4 sentences)

Sequence

cuuuguUGGAGAAGCAGGGUACGUGCAacgauagaaacgacgaguuguuguuuauugcacgugcucuaccucuccaacguaga
((.(((((((((.(.(((((((((((((.(((((.(((.....))).)))))..))))))))))))).).))))))))).)).

Structure

-  u         A C             -c     a   g 
 cu uguUGGAGA G AGGGUACGUGCAa  gauag aac a
 || ||||||||| | |||||||||||||  ||||| ||| c
 ga gcaaccucu c ucucgugcacguu  uuguu uug g
a  u         c a             au     g   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature cca-miR164

• Accession: MIMAT0024515
• Description: Cynara cardunculus cca-miR164 mature miRNA
• Sequence: 7 - UGGAGAAGCAGGGUACGUGCA - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22272770
   The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
   De Paola D, Cattonaro F, Pignone D, Sonnante G
   BMC Genomics (2012) 13:41