Stem-loop cca-MIR395b

Accession

MI0021081

Description

Cynara cardunculus cca-MIR395b precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

1 open access papers mention cca-MIR395b
(1 sentences)

Sequence

aagugucccuaugaguuccuucgagcacuucauugggaagcuuuauuuaggauuuccuaCUGAAGUGUUUGGAGGAACUCuaagugccacuu
(((((.(.((..((((((((((((((((((((.((((((((((.....))).))))))).))))))))))))))))))))..)).).)))))

Structure

     u c  au                    u       -   u 
aagug c cu  gaguuccuucgagcacuuca ugggaag cuu a
||||| | ||  |||||||||||||||||||| ||||||| ||| u
uucac g ga  CUCAAGGAGGUUUGUGAAGU auccuuu gga u
     c u  au                    C       a   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature cca-miR395b

• Accession: MIMAT0024527
• Description: Cynara cardunculus cca-miR395b mature miRNA
• Sequence: 60 - CUGAAGUGUUUGGAGGAACUC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22272770
   The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
   De Paola D, Cattonaro F, Pignone D, Sonnante G
   BMC Genomics (2012) 13:41