Stem-loop cca-MIR395c

Accession

MI0021082

Description

Cynara cardunculus cca-MIR395c precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

1 open access papers mention cca-MIR395c
(1 sentences)

Sequence

aagugucccucagagauccuccgaacacuucauugggauguuuuguuuaggauuuccuaCUGAAGUGUUUGGAGGAACUCcaagcgucgcuu
(((((.(.((..(((.((((((((((((((((.(((((.(((((....))))).))))).)))))))))))))))).)))..)).).)))))

Structure

     u c  ca   a                u     u     g 
aagug c cu  gag uccuccgaacacuuca uggga guuuu u
||||| | ||  ||| |||||||||||||||| ||||| |||||  
uucgc g ga  CUC AGGAGGUUUGUGAAGU auccu uagga u
     u c  ac   A                C     u     u 

Annotation confidence Not enough data

Genome context

Unknown

Mature cca-miR395c

• Accession: MIMAT0024528
• Description: Cynara cardunculus cca-miR395c mature miRNA
• Sequence: 60 - CUGAAGUGUUUGGAGGAACUC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22272770
   The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
   De Paola D, Cattonaro F, Pignone D, Sonnante G
   BMC Genomics (2012) 13:41