Stem-loop cca-MIR399

Accession

MI0021086

Description

Cynara cardunculus cca-MIR399 precursor miRNA

Gene family

MIPF0000015; MIR399

Sequence

guauuacugggcaauuacucuuuuagcaguuuguaagcaacaugcuaccucuaacUGCCAAAGGAGAUUUGCCCUGuaauaca
(((((((.((((((.(.(((((((.((((((.(..((((...))))....).)))))).)))))))).)))))).))))))).

Structure

-       u      u a       a      u --ua    a 
 guauuac gggcaa u cucuuuu gcaguu g    agca  
 ||||||| |||||| | ||||||| |||||| |    |||| c
 cauaauG CCCGUU A GAGGAAA CGUcaa c    ucgu  
a       U      U -       C      u ucca    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature cca-miR399

• Accession: MIMAT0024533
• Description: Cynara cardunculus cca-miR399 mature miRNA
• Sequence: 56 - UGCCAAAGGAGAUUUGCCCUG - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22272770
   The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
   De Paola D, Cattonaro F, Pignone D, Sonnante G
   BMC Genomics (2012) 13:41