Stem-loop cca-MIR6107

Accession

MI0021092

Description

Cynara cardunculus cca-MIR6107 precursor miRNA

Sequence

caaccaacuguaccagauguuguccgcuuuauccacacaugggcccacaauuuuaaaauguuucuguccagguguggauAAAGGGGACAAUAUCUGGUACGGUuggcuga
((.((((((((((((((((((((((.((((((((((((.(((((..(((.........)))....))))).)))))))))))).)))))))))))))))))))))).)).

Structure

-  a                      g            a     --cc   auu 
 ca ccaacuguaccagauguugucc cuuuauccacac ugggc    aca   u
 || |||||||||||||||||||||| |||||||||||| |||||    |||   u
 gu gguUGGCAUGGUCUAUAACAGG GAAAuaggugug accug    ugu   a
a  c                      G            g     ucuu   aaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature cca-miR6107

• Accession: MIMAT0024541
• Description: Cynara cardunculus cca-miR6107 mature miRNA
• Sequence: 80 - AAAGGGGACAAUAUCUGGUACGGU - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22272770
   The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
   De Paola D, Cattonaro F, Pignone D, Sonnante G
   BMC Genomics (2012) 13:41