miRBase entry: cca-MIR6108g

Stem-loop cca-MIR6108g


Accession
MI0021095
Description
Cynara cardunculus cca-MIR6108g precursor miRNA

Literature search
1 open access papers mention cca-MIR6108g
(2 sentences)

Sequence

uggaugucccuucuuaaccuucugaacgcaacccaaccucaguuaguugauuaacuggguuggauuccggUGAGAAGCGUAAGAAGGGAUCcccaccc
(((..(((((((((((..(((((.(.((.((.((((((.((((((......)))))))))))).)).)).).)))))..)))))))))))..)))...

Structure
---   au           ac     g a  c  c      u      gu 
   ugg  gucccuucuua  cuucu a cg aa ccaacc caguua  u
   |||  |||||||||||  ||||| | || || |||||| ||||||   
   acc  UAGGGAAGAAU  GAAGA U gc uu gguugg gucaau  g
ccc   cC           GC     G g  c  a      -      ua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cca-miR6108g

Accession MIMAT0024544
Description Cynara cardunculus cca-miR6108g mature miRNA
Sequence 71 - UGAGAAGCGUAAGAAGGGAUC - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22272770
    The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
    De Paola D, Cattonaro F, Pignone D, Sonnante G
    BMC Genomics (2012) 13:41