miRBase entry: cca-MIR6112

Stem-loop cca-MIR6112


Accession
MI0021100
Description
Cynara cardunculus cca-MIR6112 precursor miRNA


Sequence

gugagaccauuuuuuuacaauugaaauuucacaacaaaacacugugaagguaaaagaaauccgaacuuucacaguguuuggcuguGAAGUUUCAAGUGUAAAAAAGUGGuuucacg
(((((((((((((((((((.(((((((((((((.(.(((((((((((((((.............))))))))))))))).).))))))))))))).))))))))))))))))))).

Structure
-                   a             a a               aaaag 
 gugagaccauuuuuuuaca uugaaauuucaca c aaacacugugaaggu     a
 ||||||||||||||||||| ||||||||||||| | |||||||||||||||     a
 cacuuuGGUGAAAAAAUGU AACUUUGAAGugu g uuugugacacuuuca     a
g                   G             c g               agccu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cca-miR6112

Accession MIMAT0024551
Description Cynara cardunculus cca-miR6112 mature miRNA
Sequence 86 - GAAGUUUCAAGUGUAAAAAAGUGG - 109
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22272770
    The miRNAome of globe artichoke: conserved and novel micro RNAs and target analysis
    De Paola D, Cattonaro F, Pignone D, Sonnante G
    BMC Genomics (2012) 13:41