miRBase entry: bta-mir-4286-1

Stem-loop bta-mir-4286-1


Accession
MI0021119
Description
Bos taurus bta-mir-4286-1 precursor miRNA

Literature search
2 open access papers mention bta-mir-4286-1
(3 sentences)

Sequence

316 reads, 12 reads per million, 65 experiments
ggccuacACCCCACUCCUGGUACCagcugcuugggcccccccuguggcacaugccucugagauggagggauuaaug
........((((((((..((((...(((((..(((...)))..)))))...))))...))).))).))........

Structure
ggccuacA  -   -   -CU    CCa     uu   c 
        CC CCA CUC   GGUA   gcugc  ggg  
        || ||| |||   ||||   |||||  ||| c
        gg ggu gag   ccgu   cggug  ccc  
guaauuag  a   a   ucu    aca     uc   c 


Annotation confidence Not enough data
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Genome context
chr19: 40861010-40861085 [-]

Database links

Mature bta-miR-4286

Accession MIMAT0024575
Description Bos taurus bta-miR-4286 mature miRNA
Sequence 8 - ACCCCACUCCUGGUACC - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22298343
    Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
    Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
    J Cell Biochem (2012) 113:2098-2111