Stem-loop bta-mir-652

Accession

MI0021123

Description

Bos taurus bta-mir-652 precursor miRNA

Literature search

22 open access papers mention bta-mir-652
(42 sentences)

Sequence

417705 reads, 166.0 reads per million, 320 experiments

acgaauggcuaugcacugcACAACCCUAGGAGAGGGUGCCAUUcacauagacuagaauugAAUGGCGCCACUAGGGUUGUGcagugcacaaccuacac
......((...((((((((((((((((((.....(((((((((((.............))))))))))).))))))))))))))))))...)).....

Structure

acgaau  cua                  GAGAG           cauag 
      gg   ugcacugcACAACCCUAG     GGUGCCAUUca     a
      ||   ||||||||||||||||||     |||||||||||     c
      cc   acgugacGUGUUGGGAUC     CCGCGGUAAgu     u
-cacau  aac                  ----A           uaaga 

Annotation confidence High

Genome context

X: 58480886-58480983 [+]

Mature bta-miR-652-5p

• Accession: MIMAT0050975
• Description: Bos taurus bta-miR-652-5p mature miRNA
• Sequence: 20 - ACAACCCUAGGAGAGGGUGCCAUU - 43
• Evidence: experimental ; Illumina [1]

Mature bta-miR-652-3p

• Accession: MIMAT0024578
• Description: Bos taurus bta-miR-652-3p mature miRNA
• Sequence: 61 - AAUGGCGCCACUAGGGUUGUG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22298343
   Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
   Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
   J Cell Biochem (2012) 113:2098-2111